WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00022511 Secondary Identifier  JA:ZK1151.1

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006876 vab-10 ZK1151.1 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1151.1c ZK1151.1c 14832   I: 11747762-11747801
CDS:ZK1151.1j ZK1151.1j 14799   I: 11747762-11747801
CDS:ZK1151.1d ZK1151.1d 10182   I: 11764837-11770713
CDS:ZK1151.1h ZK1151.1h 10275   I: 11764837-11770713
CDS:ZK1151.1b ZK1151.1b 10716   I: 11764837-11770713
CDS:ZK1151.1i ZK1151.1i 4494   I: 11773361-11773513
CDS:ZK1151.1a ZK1151.1a 11085   I: 11764837-11770713
CDS:ZK1151.1e ZK1151.1e 9936   I: 11764837-11770713
CDS:ZK1151.1f ZK1151.1f 9933   I: 11764837-11770713
CDS:ZK1151.1k ZK1151.1k 14460   I: 11747762-11747801
CDS:ZK1151.1l ZK1151.1l 15180   I: 11747762-11747801
CDS:ZK1151.1m ZK1151.1m 14841   I: 11747762-11747801

1 Laboratories

Primary Identifier
JA

0 Phenotype

8 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0001037 sterile progeny Any variation that compromises the reproductive ability of the progeny of an animal.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005654

0 Strain