WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00024958 Genotype  NL4256 rrf-3(pk1426)
Secondary Identifier  Simmer:D2030.9:Screen_B

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008419 wdr-23 D2030.9 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2030.9a D2030.9a 1716   I: 7596526-7596610
CDS:D2030.9c D2030.9c 1692   I: 7596526-7596610
CDS:D2030.9b D2030.9b 1593   I: 7597174-7597212
CDS:D2030.9d D2030.9d 1497   I: 7598353-7598436
CDS:D2030.9e D2030.9e 1473   I: 7598353-7598436

1 Laboratories

Primary Identifier
NL

0 Phenotype

10 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0001037 sterile progeny Any variation that compromises the reproductive ability of the progeny of an animal.
WBPhenotype:0000060 adult lethal Premature lethality during the adult stage. When applied to large-scale RNAi screens in C. elegans, this phenotype is present in at least 10% of analyzed worms, or at least 30% in the case of rrf-3 perturbed background.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006395

0 Strain