WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00025262 Genotype  NL4256 rrf-3(pk1426)
Secondary Identifier  Simmer:F26H11.3:Repeat_a

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009180 nurf-1 F26H11.2 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26H11.2a F26H11.2a 6594   II: 14390720-14391012
CDS:F26H11.2c F26H11.2c 6585   II: 14390720-14391012
CDS:F26H11.2s F26H11.2s 6600   II: 14390720-14391012
CDS:F26H11.2n F26H11.2n 6591   II: 14390720-14391012
CDS:F26H11.2l F26H11.2l 6228   II: 14391754-14392340
CDS:F26H11.2m F26H11.2m 6222   II: 14391754-14392340
CDS:F26H11.2o F26H11.2o 1707   II: 14401682-14401783
CDS:F26H11.2e F26H11.2e 1218   II: 14404654-14404684
CDS:F26H11.2f F26H11.2f 1533   II: 14405545-14405890
CDS:F26H11.2j F26H11.2j 435   II: 14407276-14407351
CDS:F26H11.2d F26H11.2d 2427   II: 14400082-14400531
CDS:F26H11.2p F26H11.2p 1359   II: 14403527-14403698

1 Laboratories

Primary Identifier
NL

0 Phenotype

10 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0001037 sterile progeny Any variation that compromises the reproductive ability of the progeny of an animal.
WBPhenotype:0000060 adult lethal Premature lethality during the adult stage. When applied to large-scale RNAi screens in C. elegans, this phenotype is present in at least 10% of analyzed worms, or at least 30% in the case of rrf-3 perturbed background.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006395

0 Strain