WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00068303 Phenotype Remark  vacuolated structures present

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004698 rsp-1 W02B12.3 Caenorhabditis elegans
WBGene00004699 rsp-2 W02B12.2 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02B12.3b W02B12.3b 447   II: 11453981-11454103
CDS:W02B12.3c W02B12.3c 513   II: 11454919-11454921
CDS:W02B12.2 W02B12.2 846   II: 11451663-11451756
CDS:W02B12.3a W02B12.3a 939   II: 11453981-11454103

0 Laboratories

6 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000357 unfertilized oocytes laid Animals lay inactivated oocytes. In C elegans this may be due to perturbations that eliminate spermatogenesis or result in the production of defective sperm.
WBPhenotype:0000670 spermatogenesis variant Any variation in the processes that influence the generation and maturation of spermatozoa (motile sperm) compared to control.
WBPhenotype:0001036 sterile F1 Any variation that compromises the reproductive ability of an F1 generation animal.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000388 sperm morphology variant Any variation in the form, structure or composition of the mature male gamete, which merges with an oocyte to create a fertilized embryo copared to control (Wormatlas).

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000977 somatic gonad morphology variant Animals exhibit variations in the form, structure or composition of the components of the gonad that are separate from the germline proper compared to control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004261

1 Strain

WormBase ID
WBStrain00000001