WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00102771 Phenotype Remark  Authors report a decrease in lipid droplet size as well as growth rate variant, slim, lethal and larval arrest phenotypes (see Table 3 in paper) in response to acs-1 RNAi
Remark  (Table 3, Figure 4, 5) acs-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018488 acs-1 F46E10.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46E10.1c F46E10.1c 1737   V: 6529269-6529439
CDS:F46E10.1a F46E10.1a 1872   V: 6525095-6525136
CDS:F46E10.1b F46E10.1b 1794   V: 6527511-6527520

1 Laboratories

Primary Identifier
LIB

6 Phenotype

Identifier Name Description
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0001183 fat content reduced Animals exhibit less fat or lipid than observed in control animals.
WBPhenotype:0000676 growth rate variant The increase in size or mass of an organism over time during the lifespan of the organism or over any developmental stage(s) is not similar to that observed for control animals.
WBPhenotype:0000164 thin Animals exhibit a reduced girth compared to a control animal of the same developmental stage.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0002279 fat associated body size decreased Animals exhibit a decrease in the size of fat containing organelles compared to control. In C. elegans this can be assayed by BODIPY 493/503 staining.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00042257

0 Strain