WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00088832 Genotype  [GFP::TBB-2; GFP::PAR-2; mCherry::PAR-6]
Phenotype Remark  In rack-1(RNAi) embryos (Fig. 4D-F; Video S8), localization of PAR proteins during establishment phase was not unlike control embryos (Fig. 4D). During maintenance phase, however, the boundaries between the PAR-6- and PAR-2-occupied domains shifted and rotated to positions not perpendicular to the AP axis (Fig. 4E and 5C). During anaphase, the boundaries between PAR-6 and PAR-2 rotated back to wild-type positions, and the furrow formed at the correct position (Fig. 4F). Although we occasionally observe embryos showing expansion of the PAR-6 domain and shrinkage of the PAR-2 domain in these mid-focal-plane images and in cortical images from this same strain, we did not discover a significant change in average PAR domain asymmetry between rack-1(RNAi) and control embryos. Remark  rack-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010556 rack-1 K04D7.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04D7.1 K04D7.1 978   IV: 10176710-10176824

1 Laboratories

Primary Identifier
MAD

2 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001588 microtubule organization biogenesis variant Animals exhibit variations in the form, structure, composition or arrangement of a robust macromolecular array, composed primarily of tubulin, which forms long extended cytoskeletal elements compared to control (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038375

0 Strain