WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00071668 Genotype  integrated translational fusion transgene rme-2::GFP
Phenotype Remark  RNAi treatment resulted in punctate accumulation of RME-2-GFP throughout the cytoplasm (mixed secretion) (low penetrance). Remark  Secondary screen. Candidate secretion regulator based on RME-2-GFP localization (this experiment) and/or yolk uptake by oocytes (primary screen).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004824 F56B3.4 F56B3.4 Caenorhabditis elegans
WBGene00018935 skr-18 F56B3.12 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56B3.4b F56B3.4b 1563   IV: 786455-786479
CDS:F56B3.4a F56B3.4a 1899   IV: 786324-786479
CDS:F56B3.12 F56B3.12 552   IV: 794752-795259

1 Laboratories

Primary Identifier
RT

1 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00030951

0 Strain