WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00071711 Genotype  integrated translational fusion transgene rme-2::GFP
Phenotype Remark  RNAi treatment resulted in punctate accumulation of RME-2-GFP throughout the cytoplasm (mixed secretion). Remark  Secondary screen. Candidate secretion regulator based on RME-2-GFP localization (this experiment) and/or yolk uptake by oocytes (primary screen).
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002173 itr-1 F33D4.2 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D4.2a F33D4.2a 8679   IV: 7675174-7675252
CDS:F33D4.2d F33D4.2d 8511   IV: 7677568-7677581
CDS:F33D4.2g F33D4.2g 5142   IV: 7681425-7681468
CDS:F33D4.2e F33D4.2e 8574   IV: 7681425-7681468
CDS:F33D4.2f F33D4.2f 8541   IV: 7681425-7681468
CDS:F33D4.2h F33D4.2h 8604   IV: 7681425-7681468

1 Laboratories

Primary Identifier
RT

1 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00030951

0 Strain