WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097525 Genotype  tbc-2(qx20); opIs334 [Pced-1::YFP::2xFYVE] (marker for phosphatidylinositol 3-phosphate (PtdIns(3)P))
Phenotype Remark  The phagosomal accumulation of phosphatidylinositol 3-phosphate (PtdIns(3)P) was significantly reduced in animals treated with rab-5 RNAi, as determined by the Pced-1::YFP::2xFYVE transgenic marker for PtdIns(3)P Remark  (Figure 6A) rab-5 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004268 rab-5 F26H9.6 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26H9.6 F26H9.6 627   I: 9308445-9308535

1 Laboratories

Primary Identifier
XW

1 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00034674

0 Strain