WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097858 Genotype  Pced-1::CCZ-1::YFP
Phenotype Remark  sand-1 RNAi disrupted the localization of CCZ-1::YFP to phagosomes engulfing apoptotic cell corpses, suggesting a phagosome maturation defect and that SAND-1 acts upstream of CCZ-1 in the phagosome maturation pathway Remark  (Figure 3B, 3C) sand-1 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region used for curation.
Paste the following link
Lists
This RNAi isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018321 sand-1 F41H10.11 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41H10.11 F41H10.11 1380   IV: 5366868-5367058

1 Laboratories

Primary Identifier
JCP

2 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001846 phagosome maturation defective Early phagosomes fail to undergo the maturation process following the ingestion of particulate material by phagocytosis; During maturation, phagosomes acquire markers of late endosomes and lysosomes.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036342

0 Strain