WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00094026 Genotype  dcap-1::RFP; rrf-3(ok629)
Phenotype Remark  RNAi resulted in enhanced formation of P bodies throughout the whole animal Remark  (Table S1) ccr-4 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000376 ccr-4 ZC518.3 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC518.3b ZC518.3b 1842   IV: 12361654-12361694
CDS:ZC518.3a ZC518.3a 1821   IV: 12362062-12362081
CDS:ZC518.3d ZC518.3d 2034   IV: 12365545-12366340
CDS:ZC518.3c ZC518.3c 1794   IV: 12363046-12363238
CDS:ZC518.3e ZC518.3e 1203   IV: 12368430-12368463

1 Laboratories

Primary Identifier
HZ

2 Phenotype

Identifier Name Description
WBPhenotype:0001794 cytoplasmic processing body variant Discrete foci within the cytoplasm containing congregations of mRNA translational suppression and degradation mechanisms vary in their arrangement, clustering or are otherwise not well-defined compared to control.
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040559

0 Strain