WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00091320 Genotype  unc-55(e1170); [Punc-25-SNB-1::GFP]; eri-1(mg366)
Phenotype Remark  RNAi partially suppresses the loss of SNB-1::GFP puncta (marking GABAergic neuro-muscular junctions) in the ventral nerve cord caused by the unc-55(e1170) mutation Remark  (Figure 3) cnt-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000565 cnt-1 Y17G7B.15 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.15b Y17G7B.15b 2229   II: 12072302-12072458
CDS:Y17G7B.15d Y17G7B.15d 972   II: 12072302-12072458
CDS:Y17G7B.15c Y17G7B.15c 1728   II: 12072302-12072458
CDS:Y17G7B.15a Y17G7B.15a 2481   II: 12072302-12072458

1 Laboratories

Primary Identifier
NC

3 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0002001 synapse density variant The number of synapses per unit area of a neuron differs in the animal compared to that observed for control animals.
WBPhenotype:0001331 motor neuron morphology variant Animals display variations in the structure or organization of components of the motor neuron, internal to the cell itself or in relation to the cellular environment compared to that observed in control animals. A motor neuron is a neuronal cell that synapses to an effector (muscle, gland etc.).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040363

0 Strain