WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00103831 Genotype  xnIs96 [hmr-1p::HMR-1::GFP]
Phenotype Remark  Analysis of time-lapse movies of dorsal cells during mid-intercalation (150 s, two frames per second [fps]) revealed that epidermal rearrangement is associated with transient HMR-1::GFP protrusions (Figure S3D; Movie S7). Authors observed a higher rate of appearance and disappearance of these protrusions in the migrating dorsal cells of hmp-2(RNAi) embryos compared to WT embryos. Remark  (Figure S3D) hmp-2 RNAi, feeding 1:1 dilution
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001979 hmp-2 K05C4.6 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05C4.6b K05C4.6b 2115   I: 14738882-14738937
CDS:K05C4.6a K05C4.6a 2037   I: 14739591-14739630

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00048594

1 Strain

WormBase ID
WBStrain00007535