WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00082882 Genotype  Punc-54::alpha-synuclein::YFP
Phenotype Remark  Depletion of hip-1 (T12D8.8) significantly increased the number of alpha-synuclein::YFP inclusions.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011735 hip-1 T12D8.8 Caenorhabditis elegans
WBGene00011736 T12D8.9 T12D8.9 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12D8.9a T12D8.9a 3546   III: 13617364-13617421
CDS:T12D8.9b T12D8.9b 3552   III: 13617364-13617421
CDS:T12D8.8 T12D8.8 1269   III: 13614861-13615006

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001405 protein aggregation variant Variations that result in the accumulation of soluble/insoluble protein aggregates in a particular cell or tissue, compared to control. Protein aggregates are often formed by interactions between misfolded protein molecules and/or deficiencies in proper protein folding.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035420

0 Strain