WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00091438 Phenotype Remark  tat-5 RNAi results in persistent localization of Clathrin (GFP::CHC-1) and RAB-11 (GFP::RAB-11) to the plasma membrane in early embryos, whereas Clathrin and RAB-11 are mostly cytoplasmic in control embryos
Remark  (Figure 5B, 5D) tat-5 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009498 tat-5 F36H2.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H2.1a F36H2.1a 3225   I: 9234678-9234866
CDS:F36H2.1c F36H2.1c 3216   I: 9234678-9234866
CDS:F36H2.1d F36H2.1d 3180   I: 9234678-9234866
CDS:F36H2.1b F36H2.1b 3171   I: 9234678-9234866

1 Laboratories

Primary Identifier
FT

1 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040428

0 Strain