WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00088837 Genotype  [GFP::TBB-2; GFP::PAR-2; mCherry::PAR-6]
Phenotype Remark  In zen-4(RNAi) embryos, the spindle midzone was absent and cytokinesis failed. Remark  zen-4(RNAi)

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006974 zen-4 M03D4.1 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03D4.1a M03D4.1a 2328   IV: 6118224-6118666
CDS:M03D4.1b M03D4.1b 2319   IV: 6118224-6118666
CDS:M03D4.1d M03D4.1d 2364   IV: 6118224-6118666
CDS:M03D4.1f M03D4.1f 2358   IV: 6118224-6118666
CDS:M03D4.1c M03D4.1c 2334   IV: 6118224-6118666
CDS:M03D4.1e M03D4.1e 2325   IV: 6118224-6118666

1 Laboratories

Primary Identifier
MAD

2 Phenotype

Identifier Name Description
WBPhenotype:0000759 spindle defective early emb Early embryos exhibit defects in the assembly, disassembly, arrangement, elongation or stabilization of the microtubules and associated molecules that form between opposite poles of a eukaryotic cell during a cell cycle.
WBPhenotype:0001130 cytokinesis fails early emb Cells of the embryo attempt to divide but fail to form two daughter cells.

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000034 embryonic polarity variant Contents or structures of an embryonic cell are not restricted/localized to the same positions (or poles) compared with control animals.
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001588 microtubule organization biogenesis variant Animals exhibit variations in the form, structure, composition or arrangement of a robust macromolecular array, composed primarily of tubulin, which forms long extended cytoskeletal elements compared to control (Wormatlas).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038375

0 Strain