WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00083336 Phenotype Remark  Spindle density was reduced compared to controls; at anaphase, spindle poles separated abruptly and prematurely (spindle snapping)
Remark  Authors report the use of three different targeting sequences for RNAi of car-1; authors did not specify which was used for this experiment; all three have been used for curation

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012484 car-1 Y18D10A.17 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18D10A.17 Y18D10A.17 1023   I: 12904476-12904721

1 Laboratories

Primary Identifier
OD

5 Phenotype

Identifier Name Description
WBPhenotype:0001343 meiotic spindle defective early emb Early embryos exhibit defects in the assembly, disassembly, arrangement, elongation or stabilization of the microtubule spindle during a meiotic cell cycle.
WBPhenotype:0001403 antibody subcellular localization variant Any variation in the placement of a protein, as detected by antibody staining, within in a cell or cellular compartment compared to control.
WBPhenotype:0001129 cleavage furrow defective early emb Embryos exhibit defects in the formation, maintenance or termination of the groove in the cell surface near the old metaphase plate during cytokinesis.
WBPhenotype:0001102 mitotic spindle defective early emb Early embryos exhibit defects in the assembly, disassembly, arrangement, elongation or stabilization of the microtubule spindle during a mitotic cell cycle.
WBPhenotype:0001875 anaphase bridging Chromosomal masses fail to fully separate and remained linked during anaphase.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026922

0 Strain