WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078897 Genotype  rrf-1(pk1417)
Remark  Somatic cells of rrf-1(pk1417) mutant worms are resistant to dsRNA, but their germline shows an apparently normal RNAi response.
Paste the following link
Lists
This RNAi isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002173 itr-1 F33D4.2 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D4.2a F33D4.2a 8679   IV: 7675174-7675252
CDS:F33D4.2d F33D4.2d 8511   IV: 7677568-7677581
CDS:F33D4.2g F33D4.2g 5142   IV: 7681425-7681468
CDS:F33D4.2e F33D4.2e 8574   IV: 7681425-7681468
CDS:F33D4.2f F33D4.2f 8541   IV: 7681425-7681468
CDS:F33D4.2h F33D4.2h 8604   IV: 7681425-7681468

1 Laboratories

Primary Identifier
VP

0 Phenotype

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000666 ovulation variant Any variation that disrupts the release of a mature oocyte into the spermatheca (for subsequent fertilization), compared to control.
WBPhenotype:0001200 gonad sheath contraction rate reduced Basal contraction rate and or peak contraction rate of the gonadal sheath is reduced relative to control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024307

0 Strain