WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086785 Remark  paper remark: Exact sequence used for RNAi not stated by authors, genomic sequence of gene used for curation. Authors used genomic DNA as the template, with primers extended approximately 100 bp beyond the predicted 5 and 3 end of the genes.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004812 skr-6 Y37H2C.2 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37H2C.2 Y37H2C.2 321   V: 18269616-18269771

1 Laboratories

Primary Identifier
ET

0 Phenotype

9 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000081 L1 arrest The developmental program of the animals does not continue past the first larval stage (L1).
WBPhenotype:0000779 late embryonic arrest Cessation of development during the final stages of embryogenesis. In C. elegans, this stage normally occurs 620-800 min after the first cleavage at 20C and is the stage after elongation.
WBPhenotype:0002013 univalent meiotic chromosomes Chromosomes fails to pair with homologous chromosomes during the prophase stage of meiosis.
WBPhenotype:0000793 posterior body morphology variant Animals exhibit variations in the form, structure or composition of the anatomy contained in the posterior region, compared to control animals.
WBPhenotype:0001946 pachytene progression during oogenesis variant Developing oocytes show defects in their entry, progression through or exit from the pachytene stage compared to control animals. Pachytene is a cell cycle process comprising the steps by which a cell progresses through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome.
WBPhenotype:0000172 cell proliferation increased The processes governing the expansion of cell populations are altered compared to control animals, such that cell populations are increased.
WBPhenotype:0000762 spindle position defective early emb Early embryos exhibit defects in the placement of the array of microtubules and associated molecules that form between opposite poles of a eukaryotic cell during mitosis or meiosis.
WBPhenotype:0001080 excessive blebbing early emb Excessive shaking and movements are seen in the cell membrane or cytoplasm of one-cell or two-cell embryos.
WBPhenotype:0001147 polar body defective early emb Polar bodies are abnormal in the inviable one- to four-cell embryo.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005129

0 Strain