WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00069426 Phenotype Remark  RNAi treatment resulted in re-expression of GFP in the germline, which is normally silenced in the presence of the array containing repetitive copies of GFP sequences under the control of dpy-30 promoter.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

5 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018170 nspb-1 F38A5.14 Caenorhabditis elegans
WBGene00018169 nspb-2 F38A5.12 Caenorhabditis elegans
WBGene00018162 nspb-3 F38A5.5 Caenorhabditis elegans
WBGene00018167 nspb-4 F38A5.10 Caenorhabditis elegans
WBGene00018166 nspb-5 F38A5.9 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A5.5 F38A5.5 249   IV: 6594655-6594708
CDS:F38A5.10 F38A5.10 249   IV: 6598234-6598428
CDS:F38A5.9 F38A5.9 246   IV: 6599198-6599389
CDS:F38A5.12 F38A5.12 249   IV: 6591719-6591913
CDS:F38A5.14 F38A5.14 249   IV: 6590796-6590849

1 Laboratories

Primary Identifier
NL

1 Phenotype

Identifier Name Description
WBPhenotype:0000744 transgene induced cosuppression variant Animals exhibit variations in the silencing of endogenous genes after introduction of repetitive exogenous cognate DNA compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025139

1 Strain

WormBase ID
WBStrain00029019