WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098597 Genotype  rrf-1(pk1417)
Phenotype Remark  Knockdown of rpoa-2 in the whole animal (wild-type worms), or specifically in the germ line (rrf-1 mutants) or in the soma (mut-7 mutants) all affect germ cell apoptosis. Remark  rrf-1(pk1417) mutants are defective in somatic RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008781 rpoa-2 F14B4.3 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14B4.3 F14B4.3 3384   I: 9281309-9281605

1 Laboratories

Primary Identifier
WS

1 Phenotype

Identifier Name Description
WBPhenotype:0000730 apoptosis variant Animals exhibit variations in any processes that influence the programmed cell death pathway. Induction of the apoptotic pathway triggers the activity of proteolytic caspases, which in turn lead to the destruction of the cell.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00044530

0 Strain