WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097371 Phenotype Remark  RNAi results in a decreased number of apoptotic bodies in the "apoptotic zone" of the germ line after irradiation compared to wild type, suggesting that germ cells are allowed to proliferate even in the presence of DNA damage.
Remark  (Figure 1E) C25A1.6 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007707 fath-1 C25A1.5 Caenorhabditis elegans
WBGene00007708 nola-3 C25A1.6 Caenorhabditis elegans
WBGene00077526 C25A1.16 C25A1.16 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A1.6 C25A1.6 195   I: 10179042-10179236
CDS:C25A1.16a C25A1.16a 312   I: 10179238-10179318

1 Laboratories

Primary Identifier
XF

2 Phenotype

Identifier Name Description
WBPhenotype:0000184 apoptosis fails to occur Cells do not undergo the form of programmed cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), classically little or no ultrastructural modifications of cytoplasmic organelles, plasma membrane blebbing (but maintenance of its integrity until the final stages of the process) and engulfment by resident phagocytes.
WBPhenotype:0000712 germ cell ionizing radiation response variant Germ cells exhibit variations in their response to ionizing radiation compared to that observed in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027740

0 Strain