WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00097008 Genotype  rrf-3(pk1426)
Phenotype Remark  rpa-1 RNAi disrupts ATL-1 foci formation in mitotic germ cell nuclei following ionizing radiation treatment Remark  (Figure 4A5) rpa-1 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017546 rpa-1 F18A1.5 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18A1.5 F18A1.5 1968   II: 7664592-7664675

1 Laboratories

Primary Identifier
DW

2 Phenotype

Identifier Name Description
WBPhenotype:0001403 antibody subcellular localization variant Any variation in the placement of a protein, as detected by antibody staining, within in a cell or cellular compartment compared to control.
WBPhenotype:0000712 germ cell ionizing radiation response variant Germ cells exhibit variations in their response to ionizing radiation compared to that observed in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026962

0 Strain