WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101919 Phenotype Remark  28 percent of these animals have an intestine as scored by the presence of birefringent gut granules in embryos.
Remark  Exact sequence used for RNAi not stated by authors, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004804 skn-1 T19E7.2 Caenorhabditis elegans
WBGene00020585 clec-178 T19E7.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19E7.2d T19E7.2d 672   IV: 5651764-5651840
CDS:T19E7.2c T19E7.2c 1602   IV: 5651764-5651840
CDS:T19E7.1 T19E7.1 537   IV: 5653987-5654142
CDS:T19E7.2a T19E7.2a 1872   IV: 5651764-5651840
CDS:T19E7.2b T19E7.2b 933   IV: 5651764-5651840

1 Laboratories

Primary Identifier
JR

2 Phenotype

Identifier Name Description
WBPhenotype:0000706 gut granule biogenesis reduced Animals lack birefringent containing compartments in embryonic intestinal cells; however, these compartments appear in adult stages.
WBPhenotype:0000708 intestinal development variant Variations in the progression of the intestine over time from its initial formation to its mature structure compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026730

0 Strain