WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077080 Genotype  ajm-1::gfp
Phenotype Remark  Irregular and discontinuous distribution of ajm-1::gfp at the beginning and at the end of procorpus and at level of entire isthmus of apy-1(RNAi)treated worms indicates morphological defects in the pharynx. In addition the loss of a loop from the three-radiate shape of the pharynx (in cross section) and a very tight lumen were evident. Remark  exact sequence used for RNAi not stated by authors, genomic sequence of gene used for curation
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017244 apy-1 F08C6.6 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08C6.6 F08C6.6 1068   X: 7568268-7568381

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000709 pharyngeal morphology variant Variations in the form or composition of the mouthparts at the anterior end of the digestive tract which contain a series of radial muscles, related neurons and epithelial cells, and several gland cells which may aid in digestion compared to control (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031456

0 Strain