WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00072669 Genotype  rrf-3(pk1426)
Phenotype Remark  RNAi phenotype in lin-35(n2239) worms was reproducibly stronger than those observed in WT (primary screen) and rrf-3(pk1426) (secondary screen) animals. Remark  candidate lin-35 interacting gene based on results of the secondary screen
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003025 lin-40 T27C4.4 Caenorhabditis elegans
WBGene00220102 T27C4.7 T27C4.7 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27C4.4a T27C4.4a 3069   V: 3705012-3705140
CDS:T27C4.4d T27C4.4d 2613   V: 3705012-3705140
CDS:T27C4.4b T27C4.4b 2613   V: 3705012-3705140
CDS:T27C4.4e T27C4.4e 2208   V: 3705545-3707395

1 Laboratories

Primary Identifier
SV

2 Phenotype

Identifier Name Description
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000700 multivulva Multiple vulva-like protrusions are present along the ventral side of the animal. In C. elegans, this is usually a result of all six vulval precursor cells adopting primary or secondary vulval fates.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

0 Strain