WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00084427 Phenotype Remark  Epidermal attachments could not be found in nhr-25(RNAi) adults, and the structure of the epidermal basement membrane and the muscle morphology were altered as well.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003623 nhr-25 F11C1.6 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C1.6a F11C1.6a 1719   X: 13008892-13009008
CDS:F11C1.6b F11C1.6b 1479   X: 13009481-13009499

1 Laboratories

Primary Identifier
HL

4 Phenotype

Identifier Name Description
WBPhenotype:0001517 annulae morphology variant Animals exhibit variations in the circumferential pattern of ridges in the outer cortical layer of the cuticle, compared to that observed in control animals of the same developmental stage.
WBPhenotype:0001515 struts variant Animals exhibit variations in the quantity or patterning of electron-dense columnar structures that join the basal and cortical cuticle layers, from that observed in control animals.
WBPhenotype:0000076 epithelial attachment variant Variations in the adhesion of the layer of cells that cover the external surface of an organism which serves to protect the animal from external environment compared to control.
WBPhenotype:0000703 epithelial morphology variant Variations in the form, composition or structure of the layer of cells that cover the external surface of an organism and form the inner lining between the tissues and organs of that organism and the external environment compared to control. In C. elegans epithelial cells include epithelium of the alimentary tract, intestinal cells, hypodermis, interfacial cells and somatic gonad cells (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024664

0 Strain