WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101880 Phenotype Remark  Low frequency (7 percent) of hypodermal abnormalities.
Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004254 pxf-1 T14G10.2 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14G10.2a T14G10.2a 4413   IV: 10164609-10164646
CDS:T14G10.2d T14G10.2d 4044   IV: 10164609-10164646
CDS:T14G10.2b T14G10.2b 3936   IV: 10165839-10165852
CDS:T14G10.2g T14G10.2g 3441   IV: 10165839-10165852
CDS:T14G10.2e T14G10.2e 3918   IV: 10164609-10164646
CDS:T14G10.2f T14G10.2f 3567   IV: 10165839-10165852

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0000848 developmental delay The developmental progression of an animal over time, from its formation to its mature structure is delayed compared to control.
WBPhenotype:0000703 epithelial morphology variant Variations in the form, composition or structure of the layer of cells that cover the external surface of an organism and form the inner lining between the tissues and organs of that organism and the external environment compared to control. In C. elegans epithelial cells include epithelium of the alimentary tract, intestinal cells, hypodermis, interfacial cells and somatic gonad cells (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024891

0 Strain