WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00082055 Phenotype Remark  Detached pharynxes at the terminal stage.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001886 his-12 ZK131.6 Caenorhabditis elegans
WBGene00001890 his-16 ZK131.10 Caenorhabditis elegans
WBGene00001917 his-43 F08G2.2 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK131.6 ZK131.6 384   II: 13821198-13821581
CDS:F08G2.2 F08G2.2 384   II: 13827326-13827709
CDS:ZK131.10 ZK131.10 384   II: 13817760-13818143

1 Laboratories

Primary Identifier
YM

5 Phenotype

Identifier Name Description
WBPhenotype:0000867 embryonic arrest Cessation of development during any stage occurring after fertilization and until hatching compared to control.
WBPhenotype:0000242 body elongation defective The epidermal cells of the embryo fail to elongate. In C. elegans, this elongation occurs along an anterior-posterior axis, which is required to transform the bean-shaped embryo into the elongated shape of the worm.
WBPhenotype:0000707 pharyngeal development variant Variations in the progression of the pharynx (feeding organ) over time, from its formation to the mature structure compared to control. In C. elegans the pharynx is divided into the anterior and posterior regions. The anterior region includes the corpus (procorpus and metacorpus - first bulb) and the posterior region includes the isthmus and terminal bulb (second bulb).
WBPhenotype:0010004 cell corpse degradation variant Variations in the process(es) that constitute cell corpse degradation within the engulfing cell compared to control.
WBPhenotype:0000241 accumulated cell corpses Animals exhibit an increase in the quantity of cells that have undergone programmed cell death but have not been engulfed.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005085

0 Strain