WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110810 Genotype  frIs7[Pnlp-29::GFP]
Phenotype Remark  RNAi resulted in a reduction in expression of the anitmicrobial peptide gene nlp-29 in worms after infection by Drechmeria coniospora, as indicated by reduced expression of a Pnlp-29::GFP transgene, compared to controls Remark  Table S5, sheet "final 297 clones", column "Is clone/overlaps clone"
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003827 ntl-4 C49H3.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49H3.5a C49H3.5a 2391   IV: 7910646-7910681
CDS:C49H3.5c C49H3.5c 2385   IV: 7910646-7910681
CDS:C49H3.5d C49H3.5d 2397   IV: 7910646-7910681
CDS:C49H3.5e C49H3.5e 2391   IV: 7910646-7910681

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002460 no induction of antimicrobial peptide expression after infection Animals exhibit no induction of expression of an antimicrobial peptide after an infection, unlike control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00049531

0 Strain