WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00093710 Genotype  GFP::H2B::mom-2(3'UTR)
Phenotype Remark  oma-1/oma-2 double RNAi results in ectopic expression (derepression) of the GFP::Histone2B(H2B)::mom-2(3'UTR) transgene in oocytes, suggesting repression of mom-2 expression by OMA-1 and/or OMA-2 via the mom-2 3'UTR. oma-1/oma-2 RNAi animals do not produce embryos. Remark  (Figure 2C) oma-1/oma-2 double RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003864 oma-1 C09G9.6 Caenorhabditis elegans
WBGene00003865 oma-2 ZC513.6 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G9.6 C09G9.6 1224   IV: 8889086-8889123
CDS:ZC513.6 ZC513.6 1182   V: 8029509-8029546

1 Laboratories

Primary Identifier
TX

2 Phenotype

Identifier Name Description
WBPhenotype:0001276 ectopic expression transgene Any variation in the cellular expression of a gene product produced by exogenous DNA that has been introduced into the organism such that it now expresses in cells/tissues not seen when compared to the expression of that gene product in control animals.
WBPhenotype:0000186 oogenesis variant Any aberrancy in the processes that influence the generation and maturation of oocytes compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00044315

0 Strain