WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101781 Genotype  rrf-3(pk1426) II; ccIs4438 (intrinsic CC(CoelomoCyte)::gfp) III; ayIs2(egl-15::gfp) IV; ayIs6(hlh-8::gfp) X
Phenotype Remark  Embryonic RNAi targeting ceh-34 resulted in adult animals (the few that escape lethality) lacking the two posterior (M-lineage derived) coelomocytes (CCs) as well frequently missing the embryonic CCs, as indicated by loss of expression of the 'intrinsic CC::gfp' coelomocyte marker Remark  (Figure 1F,G, Table 1) ceh-34 RNAi-E (embryonic RNAi)

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000455 ceh-34 C10G8.6 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10G8.6 C10G8.6 771   V: 5315694-5315874

1 Laboratories

Primary Identifier
LW

4 Phenotype

Identifier Name Description
WBPhenotype:0000095 M lineage variant The descendants of the M precursor cell exhibit variations in developmental programs compared to their counterparts in control animals. In C. elegans the M lineage is a postembryonic mesodermal lineage.
WBPhenotype:0000961 pattern of transgene expression variant Any variation in the cellular or subcellular pattern of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0000852 coelomocyte development variant Variations in the progression of a free-floating spherical cell lying in the pseudocoelomic cavity of animals that can endocytose many compounds, possibly for immune surveillance, over time from an initial condition to a later condition compared to control animals.
WBPhenotype:0001912 fewer coelomocytes The number of coelomocytes are reduced compared to control animals. Coelomocytes are free-floating spherical cells lying in the pseudocoelomic cavity of animals that can endocytose many compounds.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00033137

0 Strain