WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00103861 Genotype  AWB::unc-31RNAi (AWB::unc-31KD)
Phenotype Remark  AWB::unc-31RNAi transgenic strains grown on OP50 and HB101 both showed increased success of late-life fertilization. Remark  Authors inhibited neuropeptide release from AWB neurons by expressing dsRNA against C. elegans CAPS homolog UNC-31 (AWB::unc-31KD), which is necessary for DCV, but not SCV, release. Exact sequence used for RNAi not stated by authors, spliced coding region of exons 10-13 of ZK897.1a used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006767 unc-31 ZK897.1 Caenorhabditis elegans

17 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK897.1a ZK897.1a 4062   IV: 12773886-12773945
CDS:ZK897.1b ZK897.1b 4026   IV: 12773886-12773945
CDS:ZK897.1h ZK897.1h 4101   IV: 12773886-12773945
CDS:ZK897.1j ZK897.1j 4206   IV: 12773886-12773945
CDS:ZK897.1k ZK897.1k 4194   IV: 12773886-12773945
CDS:ZK897.1l ZK897.1l 4185   IV: 12773886-12773945
CDS:ZK897.1m ZK897.1m 4173   IV: 12773886-12773945
CDS:ZK897.1o ZK897.1o 4137   IV: 12773886-12773945
CDS:ZK897.1p ZK897.1p 4170   IV: 12773886-12773945
CDS:ZK897.1q ZK897.1q 4149   IV: 12773886-12773945
CDS:ZK897.1c ZK897.1c 4137   IV: 12773886-12773945
CDS:ZK897.1e ZK897.1e 2793   IV: 12780966-12780971
CDS:ZK897.1d ZK897.1d 2682   IV: 12780966-12780971
CDS:ZK897.1i ZK897.1i 4158   IV: 12773886-12773945
CDS:ZK897.1n ZK897.1n 4149   IV: 12773886-12773945
CDS:ZK897.1r ZK897.1r 4113   IV: 12773886-12773945
CDS:ZK897.1s ZK897.1s 2805   IV: 12780966-12780971

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000806 hermaphrodite fertility variant Hermaphrodites exhibit variations in the time of onset or duration of the fertile period, or variations in the production of viable offspring, including number and state of fertilized eggs laid, compared to controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00048435

0 Strain