WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00093154 Phenotype Remark  ufd-1 RNAi resulted in the accumulation of large, dark-staining intestinal granules
Remark  (Figure 5B) ufd-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006733 ufd-1 F19B6.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19B6.2b F19B6.2b 1011   IV: 12329512-12329651
CDS:F19B6.2a F19B6.2a 1029   IV: 12329512-12329651

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001919 gut granules enlarged Animals exhibit larger inclusions within the intestinal cytoplasm, including birefringent crystalline objects and other dark-staining endosomes. In C. elegans these contents typically include glycogen granules (polysaccharide storage), rhabditin (carbohydrate storage), yolk granules (lipid and protein), and concentrated waste products (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00030999

0 Strain