WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00093805 Phenotype Remark  Gonad arms were shorter. The gonad was also distinctive in the expanded transition zone compared with the wild-type gonad.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006596 top-3A Y56A3A.27 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y56A3A.27 Y56A3A.27 2280   III: 11950018-11950269

1 Laboratories

Primary Identifier
NB

4 Phenotype

Identifier Name Description
WBPhenotype:0000399 somatic gonad development variant Any variation in the progression of the components of the gonad that are separate from the germline proper over time from its formation to its mature structure compared to control (Wormatlas).
WBPhenotype:0000188 gonad arm morphology variant Any variation in the 'arm-like' form, structure or composition of the specialized tissue of the reproductive tract that produces gametes compared to control. In C. elegans the reproductive tract in the hermaphrodite has two equivalent gonad 'arms', while the male has a one-armed gonad.
WBPhenotype:0000892 hermaphrodite germline proliferation variant Nuclear divisions in the germ line of hermaphrodites are either expanded are reduced compared to control.
WBPhenotype:0001958 gonad degenerate Animals contain a gonad that initially functioned, but subsequently stopped. In hermaphrodites or females there is often the presence old embryos and/or hatched larva, but no young embryos, in the uterus.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004118

0 Strain