WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00091615 Remark  (Figure 8A) mdf-2 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003161 mdf-2 Y69A2AR.30 Caenorhabditis elegans
WBGene00023188 Y69A2AR.t2 Y69A2AR.t2 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.30c Y69A2AR.30c 423   IV: 2636550-2636621
CDS:Y69A2AR.30b Y69A2AR.30b 351   IV: 2640546-2640679
CDS:Y69A2AR.30a Y69A2AR.30a 612   IV: 2636550-2636621

1 Laboratories

Primary Identifier
BN

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040620

1 Strain

WormBase ID
WBStrain00000001