WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098347 Phenotype Remark  ifa-1 RNAi results in embryos with fewer apoptotic corpses than wild type embryos
Remark  (Data not shown) ifa-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002050 ifa-1 F38B2.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38B2.1a F38B2.1a 1728   X: 11271248-11271269
CDS:F38B2.1d F38B2.1d 1779   X: 11271248-11271320
CDS:F38B2.1b F38B2.1b 1728   X: 11271659-11271680
CDS:F38B2.1c F38B2.1c 1704   X: 11273272-11273341
CDS:F38B2.1e F38B2.1e 1815   X: 11272797-11272905

1 Laboratories

Primary Identifier
YW

2 Phenotype

Identifier Name Description
WBPhenotype:0000965 somatic cell death variant Animals exhibit variations in the programmed cell death pathway that is triggered in cells other than germ cells and that is not subject to upstream checkpoint regulation.
WBPhenotype:0002045 cell corpse number decreased Animals exhibit fewer cell corpses compared to controls at the same developmental life stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041105

0 Strain