WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00108356 Genotype  uIs57 [Punc-119::sid-1, Punc-119::yfp, Pmec-6::mec-6]
Remark  hmr-1 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of exons 1 and 2 of shortest transcript of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001980 hmr-1 W02B9.1 Caenorhabditis elegans
WBGene00014914 Y52B11A.11 Y52B11A.11 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y52B11A.11 Y52B11A.11 1026   I: 11067699-11067767
CDS:W02B9.1b W02B9.1b 8763   I: 11076372-11076623
CDS:W02B9.1e W02B9.1e 2805   I: 11076372-11076623
CDS:W02B9.1a W02B9.1a 3810   I: 11076372-11076623
CDS:W02B9.1d W02B9.1d 3195   I: 11076372-11076623

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001310 neuron positioning variant The placement of neuronal cells, as a whole or of a specific class of neuron in the animal, deviates from that observed in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00049309

0 Strain