WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101405 Phenotype Remark  hmr-1(RNAi) results in 100% embryonic lethality, primarily due to defects in ventral enclosure.
Remark  (Table 1, Data not shown) hmr-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001980 hmr-1 W02B9.1 Caenorhabditis elegans
WBGene00014914 Y52B11A.11 Y52B11A.11 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y52B11A.11 Y52B11A.11 1026   I: 11067699-11067767
CDS:W02B9.1b W02B9.1b 8763   I: 11076372-11076623
CDS:W02B9.1e W02B9.1e 2805   I: 11076372-11076623
CDS:W02B9.1a W02B9.1a 3810   I: 11076372-11076623
CDS:W02B9.1d W02B9.1d 3195   I: 11076372-11076623

1 Laboratories

Primary Identifier
SU

2 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0001908 ventral closure defective The animal displays defects in any step of the ventral enclosure process resulting an embryo that is not enclosed and or with interior cells protruding out of the embryo.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036330

0 Strain