WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00115231 Genotype  frIs7 [nlp-29p::GFP + col-12p::dsRed]
Phenotype Remark  "Consistent with previous studies (Tong et al. 2009; Ward et al. 2014; Taffoni and Pujol 2015; Zugasti et al. 2016), the nlp-29 reporter was activated by silencing the same specific dpy genes, but was also activated by loss of genes that cause severe disruption of molting or epidermal integrity (mlt-7, bli-4, klf-3, and mua-6) and slightly by loss of dpy-11, which also activated hsp-4." Remark  bli-4 (WBGene00000254) RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000254 bli-4 K04F10.4 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04F10.4c K04F10.4c 2484   I: 6342437-6342517
CDS:K04F10.4g K04F10.4g 2208   I: 6342437-6342517
CDS:K04F10.4h K04F10.4h 2241   I: 6342437-6342517
CDS:K04F10.4e K04F10.4e 2175   I: 6342437-6342517
CDS:K04F10.4a K04F10.4a 2013   I: 6342437-6342517
CDS:K04F10.4b K04F10.4b 2193   I: 6342437-6342517
CDS:K04F10.4d K04F10.4d 2829   I: 6342437-6342517
CDS:K04F10.4f K04F10.4f 2001   I: 6342437-6342517
CDS:K04F10.4i K04F10.4i 2151   I: 6342437-6342517
CDS:K04F10.4j K04F10.4j 2019   I: 6342437-6342517

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002539 antimicrobial gene expression increased Animals exhibit an increase in the expression of one or more known, endogenous, antimicrobial genes, compared to controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00053771

0 Strain