WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00115225 Genotype  rrf-1(pk1417)
Phenotype Remark  RNAi of daf-4 causes sperm-targeting defects to the spermatheca in the rrf-1(pk1417) mutant background. The rrf-1(pk1417) strain is sensitive to RNAi in the germ line and intestine, but not in the somatic gonad, muscles, neurons, etc. Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000900 daf-4 C05D2.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D2.1e C05D2.1e 2172   III: 5625142-5625282
CDS:C05D2.1c C05D2.1c 1779   III: 5626667-5626714
CDS:C05D2.1a C05D2.1a 2235   III: 5625142-5625282
CDS:C05D2.1b C05D2.1b 1578   III: 5628540-5628558

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001823 sperm recruitment variant Any variation in the mechanism by which sperm find their correct target destinations (spermatheca).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00045282

0 Strain