WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00093372 Genotype  octr-1(ok371)
Phenotype Remark  pmk-1 RNAi resulted in increased pathogen susceptibility (decreased survival) of octr-1(ok371) mutant animals exposed to pathogenic Pseudomonas aeruginosa bacteria. Remark  (Figure 2B) pmk-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004055 pmk-1 B0218.3 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0218.3 B0218.3 1134   IV: 8148806-8148954

1 Laboratories

Primary Identifier
AY

1 Phenotype

Identifier Name Description
WBPhenotype:0001013 pathogen susceptibility increased Animals are more prone to infection compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038304

0 Strain