WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00007867 Phenotype Remark  % penetrance
Remark  PCR product used to make dsRNA was amplified from genomic DNA. Secondary Identifier  PF:GL1_4A6

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003231 mex-6 AH6.5 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:AH6.5 AH6.5 1404   II: 9524181-9524309

1 Laboratories

Primary Identifier
KK

8 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0001106 spindle orientation variant AB or P1 early emb The orientation of the spindle is aberrant in either the AB or the P1 cell.
WBPhenotype:0001105 P0 spindle position abnormal Altered P0 spindle placement causes either a symmetric first division, a division in which P1 is larger than AB, or a division in which the asymmetry is exaggerated such that AB is much larger than normal.
WBPhenotype:0001123 synchronous second division early emb AB and P1 divide synchronously.
WBPhenotype:0001134 Aba ABp division axis defective early emb ABa or ABp divide in the wrong orientation.
WBPhenotype:0001125 P2 EMS synchronous division early emb P2 and EMS divide synchronously.
WBPhenotype:0001126 cell cell contacts abnormal in four cell embryo Aba, ABp, EMS, or P1 contacts fewer of its sister cells than in control embryos.
WBPhenotype:0001127 EMS anterior extension fails early emb The EMS blastomere fails to extend anteriorly and make extensive contact (hug) with the ABa blastomere.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005599

1 Strain

WormBase ID
WBStrain00000001