WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00064299 Remark  Entire sequence of clone used for RNAi not known as only the ends of the sequence were determined. The only target shown is the best match.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003258 cogc-1 Y54E10A.2 Caenorhabditis elegans
WBGene00021834 mab-31 Y54E10A.16 Caenorhabditis elegans
WBGene00220179 Y54E10A.29 Y54E10A.29 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10A.2 Y54E10A.2 2364   I: 3233391-3233458
CDS:Y54E10A.16 Y54E10A.16 1284   I: 3244573-3244902

1 Laboratories

Primary Identifier
NF

1 Phenotype

Identifier Name Description
WBPhenotype:0000195 distal tip cell migration variant Variations in the migration pattern of distal tip cells compared to control animals. In C. elegans, DTCs located on the anterior and posterior ends of the gonad primordium typically migrate in a symmetrical U-shaped pattern.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00026979

0 Strain