WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00107505 Genotype  Pacdh-1::GFP; rde-1(ne219); kbIs7[nhx-2p::rde-1 + rol-6(su1006)]
Phenotype Remark  In addition to whole-animal RNAi resulting in reduced expression of the Pacdh-1::GFP transgene in the intestine, intestine-specific RNAi also resulted in reduced expression of the Pacdh-1::GFP transgene in the intestine, suggesting cell autonomous regulation. Remark  (Figure 3A) lin-40 intestine-specific RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003025 lin-40 T27C4.4 Caenorhabditis elegans
WBGene00220102 T27C4.7 T27C4.7 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27C4.4a T27C4.4a 3069   V: 3705012-3705140
CDS:T27C4.4b T27C4.4b 2613   V: 3705012-3705140
CDS:T27C4.4d T27C4.4d 2613   V: 3705012-3705140
CDS:T27C4.4e T27C4.4e 2208   V: 3705545-3707395

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00048645

0 Strain