WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00092005 Genotype  rrf-3(pk1426); daf-2(m577); wuIs177 (Pftn-1::GFP)
Phenotype Remark  RNAi resulted in decreased expression of the Pftn-1::GFP transgene Remark  (Table S1) egr-1/lin-40 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003025 lin-40 T27C4.4 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27C4.4a T27C4.4a 3069   V: 3705012-3705140
CDS:T27C4.4e T27C4.4e 2208   V: 3705545-3707395
CDS:T27C4.4b T27C4.4b 2613   V: 3705012-3705140
CDS:T27C4.4d T27C4.4d 2613   V: 3705012-3705140

1 Laboratories

Primary Identifier
GA

1 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040863

0 Strain