WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101679 Genotype  wIs78 [SCMp::GFP marker transgene for seam cells]; kin-20(RNAi)
Remark  (Figure 8B) lit-1 RNAi (double RNAi with kin-20; see genotype)

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003048 lit-1 W06F12.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06F12.1a W06F12.1a 1905   III: 13714045-13714184
CDS:W06F12.1e W06F12.1e 1365   III: 13718359-13718466
CDS:W06F12.1c W06F12.1c 1314   III: 13719664-13719720
CDS:W06F12.1b W06F12.1b 1389   III: 13718012-13718030
CDS:W06F12.1d W06F12.1d 1806   III: 13702192-13702246

1 Laboratories

Primary Identifier
CT

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000166 seam cell fusion variant Variations in the ability of seam cells to fuse to form a continuous syncytium along the body wall late larval development, (separate from the hyp 7 syncytium), compared to control (WormAtlas). Hypodermal seam cells lie along the lateral body wall to form longitudinal stripes of epithelial cells underlying the alae, and are required for alae formation.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00037838

0 Strain