WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098016 Genotype  gla-3(op216)
Phenotype Remark  RNAi-mediated knockdown of lst-4 led to a strong apoptotic cell corpse clearance defect in the germline. Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. gla-3 mutants used in this experiment as they have an increased number of apoptotic germ cells.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003086 lst-4 Y37A1B.2 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1B.2b Y37A1B.2b 1779   IV: 14061369-14061602
CDS:Y37A1B.2c Y37A1B.2c 1701   IV: 14061369-14061602
CDS:Y37A1B.2d Y37A1B.2d 1695   IV: 14061369-14061602
CDS:Y37A1B.2a Y37A1B.2a 495   IV: 14066733-14067029

1 Laboratories

Primary Identifier
WS

1 Phenotype

Identifier Name Description
WBPhenotype:0001180 accumulated germline cell corpses Animals exhibit an increase in the quantity of germ line cells that have undergone programmed cell death but have not been engulfed.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038320

0 Strain