WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00092215 Genotype  eri-1(mg366)
Phenotype Remark  Enhanced-RNAi mutant eri-1(mg366) animals were subjected to feeding RNAi with 3 different clones (ilys-3, Y65B4BR.1, lys-5) and subsequently transferred to Staphylococcus aureus pathogenesis assays. The S. aureus strain used was NCTC 8325. The effect of the three clones is synthetic as each individual knockdown by RNAi did not show an increase in pathogen susceptibility. Remark  Enhanced-RNAi mutant eri-1(mg366) animals were subjected to feeding RNAi with 3 different clones (ilys-3, Y65B4BR.1, lys-5) and subsequently transferred to Staphylococcus aureus pathogenesis assays. The S. aureus strain used was NCTC 8325. The effect of the three clones is synthetic as each individual knockdown by RNAi did not show an increase in pathogen susceptibility.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003094 lys-5 F58B3.2 Caenorhabditis elegans
WBGene00003095 lys-6 F58B3.3 Caenorhabditis elegans
WBGene00016670 ilys-3 C45G7.3 Caenorhabditis elegans
WBGene00022040 Y65B4BR.1 Y65B4BR.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y65B4BR.1 Y65B4BR.1 1134   I: 562763-562869
CDS:C45G7.3 C45G7.3 420   IV: 2464485-2464518
CDS:F58B3.2 F58B3.2 648   IV: 11624296-11624738
CDS:F58B3.3 F58B3.3 645   IV: 11626962-11627404

1 Laboratories

Primary Identifier
JIN

1 Phenotype

Identifier Name Description
WBPhenotype:0001013 pathogen susceptibility increased Animals are more prone to infection compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041294

0 Strain