WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00093708 Genotype  glo-1::GFP (hjIs9)
Phenotype Remark  icd-1 RNAi resulted in enlarged gut granules containing lipofuscin and positive for transgenic GLO-1::GFP Remark  (Figure 7,8) icd-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002045 icd-1 C56C10.8 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56C10.8 C56C10.8 486   II: 6587967-6588025

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0002097 lysosome morphology variant Any variation in the form or composition of membrane bound organelles, known as lysosomes, that have an acidic interior and generally act to digest components of the cell, compared to control.
WBPhenotype:0001919 gut granules enlarged Animals exhibit larger inclusions within the intestinal cytoplasm, including birefringent crystalline objects and other dark-staining endosomes. In C. elegans these contents typically include glycogen granules (polysaccharide storage), rhabditin (carbohydrate storage), yolk granules (lipid and protein), and concentrated waste products (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041512

1 Strain

WormBase ID
WBStrain00040193